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@mahmoodlab

Mahmood Lab @ Harvard/MGB

AI for Pathology Image Analysis Lab @ HMS / BWH

Pinned

  1. CLAM CLAM Public

    Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

    Python 915 318

  2. TriPath TriPath Public

    Analysis of 3D pathology samples using weakly supervised AI - Cell

    Python 70 4

  3. UNI UNI Public

    Towards a general-purpose foundation model for computational pathology - Nature Medicine

    Jupyter Notebook 197 25

  4. CONCH CONCH Public

    A vision-language foundation model for computational pathology - Nature Medicine

    Python 157 11

  5. TANGLE TANGLE Public

    Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024

    Python 40

  6. PANTHER PANTHER Public

    Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024

    Jupyter Notebook 31 1

Repositories

Showing 10 of 25 repositories
  • PANTHER Public

    Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024

    Jupyter Notebook 31 1 0 0 Updated May 21, 2024
  • TANGLE Public

    Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024

    Python 40 0 1 0 Updated May 21, 2024
  • Patch-GCN Public

    Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021

    Python 104 GPL-3.0 29 6 1 Updated May 14, 2024
  • TriPath Public

    Analysis of 3D pathology samples using weakly supervised AI - Cell

    Python 70 4 0 0 Updated May 10, 2024
  • CLAM Public

    Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

    Python 915 GPL-3.0 318 10 4 Updated Apr 29, 2024
  • CPATH_demographics Public

    Demographic bias in misdiagnosis by computational pathology models - Nature Medicine

    Python 12 2 0 0 Updated Apr 29, 2024
  • tox-foundation-ui Public
    JavaScript 0 MIT 0 0 0 Updated Apr 7, 2024
  • CONCH Public

    A vision-language foundation model for computational pathology - Nature Medicine

    Python 157 11 3 0 Updated Apr 6, 2024
  • UNI Public

    Towards a general-purpose foundation model for computational pathology - Nature Medicine

    Jupyter Notebook 197 25 11 1 Updated Mar 29, 2024
  • SurvPath Public

    Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024

    Python 63 2 1 0 Updated Mar 25, 2024
View all repositories

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